Back to search

Chaga · 2021 · Preprint

High relevance

Convergent evolution of mevalonate pathway in Inonotus obliquus and Betula pendula

Inonotus obliquus

SpeciesChaga
JournalNot listed
Year2021

Key points

  • Inonotus obliquus, Chaga mushroom, is a fungal species from Hymenochaetaceae family ( Basidiomycota ) which has been widely used for traditional medicine in Europe and Asia
  • Here, chaga genome was sequenced using Pacbio sequencing into a 50.7Mbp assembly consisting of 301 primary contigs with an N50 value of 375 kbp
  • Genome evolution analyses revealed a lineage-specific whole genome duplication event and an expansion of Cytochrome P450 superfamily
  • Fungal biosynthetic clusters were enriched for tandemly duplicated genes, suggesting that biosynthetic pathway evolution has proceeded through small-scale duplications
  • Metabolomic fingerprinting confirmed a highly complex terpene biosynthesis chemistry when compared against related fungal species lacking the genome duplication event

From the paper

Abstract

Inonotus obliquus, Chaga mushroom, is a fungal species from Hymenochaetaceae family ( Basidiomycota ) which has been widely used for traditional medicine in Europe and Asia. Here, chaga genome was sequenced using Pacbio sequencing into a 50.7Mbp assembly consisting of 301 primary contigs with an N50 value of 375 kbp. Genome evolution analyses revealed a lineage-specific whole genome duplication event and an expansion of Cytochrome P450 superfamily. Fungal biosynthetic clusters were enriched for tandemly duplicated genes, suggesting that biosynthetic pathway evolution has proceeded through small-scale duplications. Metabolomic fingerprinting confirmed a highly complex terpene biosynthesis chemistry when compared against related fungal species lacking the genome duplication event.

Citation

Safronov O, Bal GL, Sipari N, Wilkens M, Safdari P, Smolander O, et al. (2021). Convergent evolution of mevalonate pathway in Inonotus obliquus and Betula pendula. https://doi.org/10.1101/2021.11.28.470225

Open citation